AT2G41710


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41710
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016352001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Gb_09764 No alias transcription factor (AP2) 0.04 Archaeplastida
MA_67041g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc02g030210.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005634 nucleus IC Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
CC GO:0000932 P-body IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004462 lactoylglutathione lyase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009734 auxin-activated signaling pathway IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009819 drought recovery IEP Neighborhood
BP GO:0010072 primary shoot apical meristem specification IEP Neighborhood
BP GO:0010074 maintenance of meristem identity IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
CC GO:0016607 nuclear speck IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031114 regulation of microtubule depolymerization IEP Neighborhood
BP GO:0031117 positive regulation of microtubule depolymerization IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032886 regulation of microtubule-based process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
CC GO:0035770 ribonucleoprotein granule IEP Neighborhood
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Neighborhood
BP GO:0040014 regulation of multicellular organism growth IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048768 root hair cell tip growth IEP Neighborhood
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Neighborhood
BP GO:0090333 regulation of stomatal closure IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
BP GO:0090421 embryonic meristem initiation IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1901881 positive regulation of protein depolymerization IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 70 128
No external refs found!