Gb_29168

Description : Ethylene-responsive transcription factor ERF012 OS=Arabidopsis thaliana (sp|q9sfe4|erf12_arath : 134.0)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0002133 (SeedPlants) Phylogenetic Tree(s): OG_06_0002133_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_29168
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44940	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.07	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.05	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.04	Archaeplastida
GSVIVT01013920001	No alias	No description available	0.04	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g09717.1	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os07g47790.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10491g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
MA_166248g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Mp6g04880.1	No alias	Ethylene-responsive transcription factor ERF008...	0.02	Archaeplastida
Pp3c14_3280V3.1	No alias	cytokinin response factor 2	0.03	Archaeplastida
Smo104978	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.04	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.08	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc12g056980.1.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e015326_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e015968_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	73	120

External Links

No external refs found!

Gb_29168

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation