AT2G42280


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000668 (LandPlants) Phylogenetic Tree(s): OG_05_0000668_tree ,
OG_06_0000736 (SeedPlants) Phylogenetic Tree(s): OG_06_0000736_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42280
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00241810 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
AMTR_s00022p00228970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
AMTR_s00079p00137860 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
AT1G18400 BEE1 BR enhanced expression 1 0.03 Archaeplastida
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.05 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
GSVIVT01008299001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01008628001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01011873001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01021032001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01023783001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_05320 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
LOC_Os01g67480.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os02g47660.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os04g41229.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os08g39630.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_158850g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Mpzg01410.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c12_25990V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c15_4760V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c9_3300V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo425336 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Smo444782 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g086870.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g034000.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g097820.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.01 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g005220.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc06g083170.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc12g010170.2.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc12g036470.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc12g098620.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc12g100140.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010060_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e011084_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e011866_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015045_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e022005_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e030754_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034528_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034605_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0046685 response to arsenic-containing substance RCA Interproscan
BP GO:0048573 photoperiodism, flowering IMP Interproscan
Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Neighborhood
MF GO:0000257 nitrilase activity IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
CC GO:0000794 condensed nuclear chromosome IEP Neighborhood
BP GO:0000919 cell plate assembly IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004033 aldo-keto reductase (NADP) activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005355 glucose transmembrane transporter activity IEP Neighborhood
MF GO:0005356 glucose:proton symporter activity IEP Neighborhood
MF GO:0005358 high-affinity glucose:proton symporter activity IEP Neighborhood
MF GO:0005451 monovalent cation:proton antiporter activity IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006885 regulation of pH IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009270 response to humidity IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009650 UV protection IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
MF GO:0009679 hexose:proton symporter activity IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010037 response to carbon dioxide IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010265 SCF complex assembly IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015081 sodium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015149 hexose transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015385 sodium:proton antiporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015491 cation:cation antiporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015804 neutral amino acid transport IEP Neighborhood
BP GO:0015824 proline transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015853 adenine transport IEP Neighborhood
BP GO:0015854 guanine transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016145 S-glycoside catabolic process IEP Neighborhood
BP GO:0016574 histone ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016815 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0018822 nitrile hydratase activity IEP Neighborhood
MF GO:0019137 thioglucosidase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019499 cyanide metabolic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0019759 glycosinolate catabolic process IEP Neighborhood
BP GO:0019762 glucosinolate catabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0030007 cellular potassium ion homeostasis IEP Neighborhood
BP GO:0030104 water homeostasis IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032104 regulation of response to extracellular stimulus IEP Neighborhood
BP GO:0032107 regulation of response to nutrient levels IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033523 histone H2B ubiquitination IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0035725 sodium ion transmembrane transport IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043620 regulation of DNA-templated transcription in response to stress IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0047427 cyanoalanine nitrilase activity IEP Neighborhood
MF GO:0047558 3-cyanoalanine hydratase activity IEP Neighborhood
BP GO:0048480 stigma development IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048871 multicellular organismal homeostasis IEP Neighborhood
MF GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity IEP Neighborhood
MF GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050878 regulation of body fluid levels IEP Neighborhood
BP GO:0050891 multicellular organismal water homeostasis IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051410 detoxification of nitrogen compound IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
MF GO:0052638 indole-3-butyrate beta-glucosyltransferase activity IEP Neighborhood
MF GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity IEP Neighborhood
BP GO:0055075 potassium ion homeostasis IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0070301 cellular response to hydrogen peroxide IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071236 cellular response to antibiotic IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071474 cellular hyperosmotic response IEP Neighborhood
BP GO:0071475 cellular hyperosmotic salinity response IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072347 response to anesthetic IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
MF GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity IEP Neighborhood
BP GO:0080024 indolebutyric acid metabolic process IEP Neighborhood
MF GO:0080061 indole-3-acetonitrile nitrilase activity IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090332 stomatal closure IEP Neighborhood
BP GO:0097237 cellular response to toxic substance IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902456 regulation of stomatal opening IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 290 336
No external refs found!