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Gb_29778


Description : histone (H2A)


Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29778
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00128810 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.05 Archaeplastida
Cre06.g264750 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g264950 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g265350 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g266700 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g268050 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g268300 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g271350 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g273900 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g274200 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g274800 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre06.g275850 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g276500 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre06.g276950 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre12.g504500 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre12.g504750 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre12.g505550 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre12.g506250 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre13.g570100 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre17.g708550 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre17.g709200 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre17.g710400 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre17.g711700 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre17.g713400 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Cre17.g714500 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
GSVIVT01002735001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01014580001 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Gb_06384 No alias histone (H2A) 0.06 Archaeplastida
LOC_Os08g33100.1 No alias histone (H2A) 0.04 Archaeplastida
MA_10425800g0010 No alias histone (H2A) 0.04 Archaeplastida
MA_10426943g0010 No alias histone (H2A) 0.05 Archaeplastida
MA_169054g0020 No alias histone (H2A) 0.05 Archaeplastida
Pp3c5_1791V3.1 No alias histone H2A 10 0.03 Archaeplastida
Pp3c5_1800V3.1 No alias histone H2A 10 0.04 Archaeplastida
Solyc06g084430.4.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc09g074300.1.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc11g073260.2.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc12g005270.2.1 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e010515_P001 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e012144_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e035183_P002 No alias histone (H2A) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 99 121
IPR007125 Histone_H2A/H2B/H3 18 96
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