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  5. Gb_29862

Gb_29862


Description : SUMO E3 ligase (SIZ1)


Gene families : OG0001463 (Archaeplastida) Phylogenetic Tree(s): OG0001463_tree ,
OG_05_0002028 (LandPlants) Phylogenetic Tree(s): OG_05_0002028_tree ,
OG_06_0002564 (SeedPlants) Phylogenetic Tree(s): OG_06_0002564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29862
Cluster HCCA: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00092680 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.03 Archaeplastida
AT5G60410 SIZ1, ATSIZ1 DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Archaeplastida
GSVIVT01025151001 No alias Protein degradation.peptide... 0.06 Archaeplastida
LOC_Os03g50980.1 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
LOC_Os05g03430.1 No alias SUMO E3 ligase (SIZ1) 0.05 Archaeplastida
MA_10436942g0020 No alias SUMO E3 ligase (SIZ1) 0.04 Archaeplastida
MA_10436970g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83870g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.04 Archaeplastida
Pp3c20_14153V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Archaeplastida
Pp3c8_11400V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.06 Archaeplastida
Solyc06g010000.3.1 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
Solyc11g069160.3.1 No alias SUMO E3 ligase (SIZ1) 0.08 Archaeplastida
Zm00001e020810_P002 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
Zm00001e027582_P001 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 119 172
IPR004181 Znf_MIZ 366 413
No external refs found!