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  5. AT2G42960

AT2G42960


Description : Protein kinase superfamily protein


Gene families : OG0000454 (Archaeplastida) Phylogenetic Tree(s): OG0000454_tree ,
OG_05_0000267 (LandPlants) Phylogenetic Tree(s): OG_05_0000267_tree ,
OG_06_0002152 (SeedPlants) Phylogenetic Tree(s): OG_06_0002152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42960
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00079270 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.TKL kinase... 0.03 Archaeplastida
AMTR_s00059p00049260 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.TKL kinase... 0.03 Archaeplastida
AT1G09440 No alias Protein kinase superfamily protein 0.03 Archaeplastida
GSVIVT01009470001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 Archaeplastida
GSVIVT01017681001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 Archaeplastida
GSVIVT01031962001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 Archaeplastida
Gb_37885 No alias receptor-like protein kinase (RLCK-V) 0.02 Archaeplastida
LOC_Os01g44110.1 No alias receptor-like protein kinase (RLCK-V) 0.03 Archaeplastida
LOC_Os02g34430.1 No alias receptor-like protein kinase (RLCK-V) 0.03 Archaeplastida
LOC_Os03g12680.1 No alias receptor-like protein kinase (RLCK-V) 0.04 Archaeplastida
LOC_Os04g35080.1 No alias receptor-like protein kinase (RLCK-V) 0.06 Archaeplastida
LOC_Os05g36050.1 No alias receptor-like protein kinase (RLCK-V) 0.02 Archaeplastida
LOC_Os10g35450.1 No alias receptor-like protein kinase (RLCK-V) 0.04 Archaeplastida
LOC_Os11g01740.1 No alias receptor-like protein kinase (RLCK-V) 0.05 Archaeplastida
MA_10430063g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_118589g0010 No alias receptor-like protein kinase (RLCK-V) 0.02 Archaeplastida
MA_174750g0010 No alias receptor-like protein kinase (RLCK-V) 0.05 Archaeplastida
Solyc01g101100.4.1 No alias Probable receptor-like protein kinase At2g42960... 0.12 Archaeplastida
Zm00001e002197_P002 No alias receptor-like protein kinase (RLCK-V) 0.03 Archaeplastida
Zm00001e008108_P001 No alias receptor-like protein kinase (RLCK-V) 0.03 Archaeplastida
Zm00001e009379_P001 No alias receptor-like protein kinase (RLCK-V) 0.05 Archaeplastida
Zm00001e014781_P001 No alias receptor-like protein kinase (RLCK-V) 0.04 Archaeplastida
Zm00001e020235_P001 No alias receptor-like protein kinase (RLCK-V) 0.03 Archaeplastida
Zm00001e027937_P001 No alias receptor-like protein kinase (RLCK-V) 0.05 Archaeplastida
Zm00001e031350_P001 No alias receptor-like protein kinase (RLCK-V) 0.02 Archaeplastida
Zm00001e032582_P001 No alias receptor-like protein kinase (RLCK-V) 0.06 Archaeplastida
Zm00001e038637_P001 No alias receptor-like protein kinase (RLCK-V) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0016301 kinase activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007584 response to nutrient IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022604 regulation of cell morphogenesis IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031122 cytoplasmic microtubule organization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031670 cellular response to nutrient IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043224 nuclear SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0043971 histone H3-K18 acetylation IEP Neighborhood
BP GO:0043972 histone H3-K23 acetylation IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044154 histone H3-K14 acetylation IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045013 carbon catabolite repression of transcription IEP Neighborhood
BP GO:0045014 carbon catabolite repression of transcription by glucose IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0045990 carbon catabolite regulation of transcription IEP Neighborhood
BP GO:0046015 regulation of transcription by glucose IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048768 root hair cell tip growth IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051510 regulation of unidimensional cell growth IEP Neighborhood
BP GO:0051513 regulation of monopolar cell growth IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0061984 catabolite repression IEP Neighborhood
BP GO:0061985 carbon catabolite repression IEP Neighborhood
BP GO:0061986 negative regulation of transcription by glucose IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 186 450
No external refs found!