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Description : F-box protein At4g35930 OS=Arabidopsis thaliana (sp|q5xf11|fb248_arath : 136.0)
Gene families : OG0002088 (Archaeplastida) Phylogenetic Tree(s): OG0002088_tree ,
OG_05_0001418 (LandPlants) Phylogenetic Tree(s): OG_05_0001418_tree ,
OG_06_0006873 (SeedPlants) Phylogenetic Tree(s): OG_06_0006873_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_30100 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01006513001 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| LOC_Os10g30280.1 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida | |
| MA_19354g0010 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Pp3c24_3500V3.1 | No alias | F-box family protein | 0.03 | Archaeplastida | |
| Pp3c9_8080V3.1 | No alias | F-box family protein | 0.05 | Archaeplastida | |
| Smo402840 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Solyc03g033390.3.1 | No alias | F-box protein At4g35930 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000776 | kinetochore | IEP | Neighborhood |
| CC | GO:0000786 | nucleosome | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| MF | GO:0003896 | DNA primase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Neighborhood |
| BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
| BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| CC | GO:0031262 | Ndc80 complex | IEP | Neighborhood |
| CC | GO:0032299 | ribonuclease H2 complex | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |