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  5. Gb_30150

Gb_30150


Description : ubiquitin-fold protein (RUB)


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000113 (LandPlants) Phylogenetic Tree(s): OG_05_0000113_tree ,
OG_06_0000087 (SeedPlants) Phylogenetic Tree(s): OG_06_0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30150
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.76 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 Archaeplastida
Cre07.g322100 No alias No description available 0.02 Archaeplastida
Mp3g22950.1 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
Mp7g14690.1 No alias component RPS27a of SSU proteome 0.03 Archaeplastida
Pp3c16_3920V3.1 No alias related to ubiquitin 1 0.02 Archaeplastida
Pp3c22_21900V3.1 No alias polyubiquitin 10 0.02 Archaeplastida
Pp3c4_11430V3.1 No alias polyubiquitin 10 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
No external refs found!