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Description : promotor-binding component TFC3 of TFIIIc transcription factor complex
Gene families : OG0001366 (Archaeplastida) Phylogenetic Tree(s): OG0001366_tree ,
OG_05_0002356 (LandPlants) Phylogenetic Tree(s): OG_05_0002356_tree ,
OG_06_0001042 (SeedPlants) Phylogenetic Tree(s): OG_06_0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_30476 | |
| Cluster | HCCA: Cluster_223 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00218290 | evm_27.TU.AmTr_v1... | RNA biosynthesis.RNA polymerase III-dependent... | 0.03 | Archaeplastida | |
| AMTR_s00029p00113670 | evm_27.TU.AmTr_v1... | RNA biosynthesis.RNA polymerase III-dependent... | 0.05 | Archaeplastida | |
| AT1G17450 | No alias | B-block binding subunit of TFIIIC | 0.07 | Archaeplastida | |
| Cpa|evm.model.tig00001428.4 | No alias | RNA biosynthesis.RNA polymerase III-dependent... | 0.04 | Archaeplastida | |
| Cre12.g518107 | No alias | RNA biosynthesis.RNA polymerase III-dependent... | 0.05 | Archaeplastida | |
| LOC_Os02g21190.1 | No alias | promotor-binding component TFC3 of TFIIIc transcription... | 0.02 | Archaeplastida | |
| MA_59941g0010 | No alias | promotor-binding component TFC3 of TFIIIc transcription... | 0.04 | Archaeplastida | |
| MA_60759g0010 | No alias | promotor-binding component TFC3 of TFIIIc transcription... | 0.04 | Archaeplastida | |
| Mp1g26830.1 | No alias | promotor-binding component TFC3 of TFIIIc transcription... | 0.05 | Archaeplastida | |
| Pp3c4_16500V3.1 | No alias | B-block binding subunit of TFIIIC | 0.09 | Archaeplastida | |
| Smo409587 | No alias | RNA biosynthesis.RNA polymerase III-dependent... | 0.06 | Archaeplastida | |
| Solyc09g009800.3.1 | No alias | promotor-binding component TFC3 of TFIIIc transcription... | 0.07 | Archaeplastida | |
| Zm00001e015839_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006013 | mannose metabolic process | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
| MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
| MF | GO:0060090 | molecular adaptor activity | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007309 | TFIIIC_Bblock-bd | 117 | 200 |
| No external refs found! |