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  5. Gb_30985

Gb_30985


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30985
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AT1G14687 AtHB32, HB32, ZHD14 homeobox protein 32 0.03 Archaeplastida
AT1G18835 MIF3 mini zinc finger 0.05 Archaeplastida
GSVIVT01009128001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
MA_461761g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_69304g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc02g067330.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc02g087970.1.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e034407_P001 No alias transcription factor (zf-HD) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 60 112
No external refs found!