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  5. Gb_36112

Gb_36112


Description : ornithine carbamoyltransferase


Gene families : OG0004102 (Archaeplastida) Phylogenetic Tree(s): OG0004102_tree ,
OG_05_0003943 (LandPlants) Phylogenetic Tree(s): OG_05_0003943_tree ,
OG_06_0006141 (SeedPlants) Phylogenetic Tree(s): OG_06_0006141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36112
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g47590.1 No alias ornithine carbamoyltransferase 0.03 Archaeplastida
Zm00001e015577_P002 No alias ornithine carbamoyltransferase 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process IEA Interproscan
MF GO:0016597 amino acid binding IEA Interproscan
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006132 Asp/Orn_carbamoyltranf_P-bd 80 221
IPR006131 Asp_carbamoyltransf_Asp/Orn-bd 227 378
No external refs found!