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  5. Gb_36878

Gb_36878


Description : 13-lipoxygenase


Gene families : OG0000150 (Archaeplastida) Phylogenetic Tree(s): OG0000150_tree ,
OG_05_0000318 (LandPlants) Phylogenetic Tree(s): OG_05_0000318_tree ,
OG_06_0000580 (SeedPlants) Phylogenetic Tree(s): OG_06_0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36878
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00205270 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.synthesis.13-lipoxygenase 0.03 Archaeplastida
AMTR_s00022p00207270 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00022p00225700 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 Archaeplastida
AMTR_s00022p00225940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 Archaeplastida
AMTR_s00024p00245050 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.06 Archaeplastida
AT1G17420 LOX3 lipoxygenase 3 0.03 Archaeplastida
AT1G72520 LOX4 PLAT/LH2 domain-containing lipoxygenase family protein 0.06 Archaeplastida
GSVIVT01000084001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 Archaeplastida
GSVIVT01003798001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Archaeplastida
GSVIVT01016738001 No alias Phytohormones.jasmonic acid.synthesis.13-lipoxygenase 0.03 Archaeplastida
GSVIVT01025341001 No alias Phytohormones.jasmonic acid.synthesis.13-lipoxygenase 0.03 Archaeplastida
Gb_15016 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 Archaeplastida
LOC_Os03g08220.1 No alias 13-lipoxygenase 0.02 Archaeplastida
LOC_Os03g49260.1 No alias Linoleate 9S-lipoxygenase 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os03g49380.1 No alias Probable linoleate 9S-lipoxygenase 4 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os04g37430.1 No alias Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os08g39840.1 No alias 13-lipoxygenase 0.05 Archaeplastida
LOC_Os08g39850.1 No alias 13-lipoxygenase 0.04 Archaeplastida
LOC_Os11g36719.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 Archaeplastida
MA_10427506g0020 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 Archaeplastida
MA_153g0020 No alias Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum... 0.03 Archaeplastida
MA_89511g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96367g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 Archaeplastida
Mp1g21930.1 No alias 13-lipoxygenase 0.02 Archaeplastida
Mp2g00660.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 Archaeplastida
Pp3c15_12980V3.1 No alias lipoxygenase 3 0.02 Archaeplastida
Pp3c15_12990V3.1 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Archaeplastida
Pp3c1_29300V3.1 No alias lipoxygenase 1 0.02 Archaeplastida
Solyc01g006555.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g099190.4.1 No alias Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum... 0.03 Archaeplastida
Solyc03g122340.3.1 No alias 13-lipoxygenase 0.05 Archaeplastida
Solyc08g029000.3.1 No alias Probable linoleate 9S-lipoxygenase 5 OS=Solanum... 0.09 Archaeplastida
Solyc09g055900.4.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Archaeplastida
Zm00001e003543_P001 No alias 13-lipoxygenase 0.06 Archaeplastida
Zm00001e005362_P001 No alias Putative linoleate 9S-lipoxygenase 3 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e005363_P001 No alias Probable linoleate 9S-lipoxygenase 4 OS=Oryza sativa... 0.06 Archaeplastida
Zm00001e007986_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017901_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 49 152
IPR013819 LipOase_C 166 836
No external refs found!