1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_38376

Gb_38376


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38376
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.02 Archaeplastida
AT3G18550 BRC1, ATTCP18, TCP18 TCP family transcription factor 0.03 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.06 Archaeplastida
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
GSVIVT01021528001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
LOC_Os03g57190.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os07g05720.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_101752g0020 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_12784g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_16704g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_547683g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_86651g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc03g045030.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc07g053410.4.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e019734_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 73 270
No external refs found!