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  5. Gb_40007

Gb_40007


Description : no description available(sp|o22633|noi4_arath : 86.7)


Gene families : OG0000954 (Archaeplastida) Phylogenetic Tree(s): OG0000954_tree ,
OG_05_0000573 (LandPlants) Phylogenetic Tree(s): OG_05_0000573_tree ,
OG_06_0001100 (SeedPlants) Phylogenetic Tree(s): OG_06_0001100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40007
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G63270 No alias RPM1-interacting protein 4 (RIN4) family protein 0.05 Archaeplastida
GSVIVT01014701001 No alias No description available 0.02 Archaeplastida
GSVIVT01030113001 No alias No description available 0.02 Archaeplastida
LOC_Os06g17870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g26110.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g012010.2.1 No alias RIN4 effector-triggered immunity RPM1-interacting factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 134 169
No external refs found!