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  5. Gb_41062

Gb_41062


Description : gamma-aminobutyric acid transporter (GAT)


Gene families : OG0001908 (Archaeplastida) Phylogenetic Tree(s): OG0001908_tree ,
OG_05_0001249 (LandPlants) Phylogenetic Tree(s): OG_05_0001249_tree ,
OG_06_0050258 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41062
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00224130 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
GSVIVT01031408001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01034731001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
Pp3c3_11320V3.1 No alias Transmembrane amino acid transporter family protein 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 2 275
No external refs found!