1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_41532

Gb_41532


Description : 1,2-beta-galactosidase. beta-galactosidase (BGAL)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0008879 (SeedPlants) Phylogenetic Tree(s): OG_06_0008879_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41532
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00054750 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 Archaeplastida
AT1G45130 BGAL5 beta-galactosidase 5 0.02 Archaeplastida
AT2G16730 BGAL13 glycosyl hydrolase family 35 protein 0.03 Archaeplastida
AT4G35010 BGAL11 beta-galactosidase 11 0.02 Archaeplastida
AT4G36360 BGAL3 beta-galactosidase 3 0.03 Archaeplastida
GSVIVT01008835001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01009791001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 Archaeplastida
GSVIVT01018853001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.09 Archaeplastida
GSVIVT01022339001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.08 Archaeplastida
GSVIVT01025170001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 Archaeplastida
LOC_Os01g39830.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
LOC_Os02g12730.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
LOC_Os03g06940.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
LOC_Os05g35360.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os09g36810.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_10427427g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_10437013g0010 No alias Beta-galactosidase 15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_11388g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc01g111540.4.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc02g078950.4.1 No alias beta-galactosidase (BGAL) 0.07 Archaeplastida
Solyc02g084720.3.1 No alias beta-galactosidase (BGAL) 0.08 Archaeplastida
Solyc03g019890.3.1 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc06g062580.3.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc10g055470.2.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Solyc11g018490.3.1 No alias beta-galactosidase (BGAL) 0.04 Archaeplastida
Zm00001e003992_P005 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019098_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019099_P001 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e020528_P001 No alias beta-galactosidase (BGAL) 0.07 Archaeplastida
Zm00001e021127_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024694_P002 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e039014_P001 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 781 858
IPR031330 Gly_Hdrlase_35_cat 39 344
No external refs found!