Description : pre-mRNA-processing protein (PRP39)
Gene families : OG0002977 (Archaeplastida) Phylogenetic Tree(s): OG0002977_tree ,
OG_05_0002339 (LandPlants) Phylogenetic Tree(s): OG_05_0002339_tree ,
OG_06_0002649 (SeedPlants) Phylogenetic Tree(s): OG_06_0002649_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e000702_P004 | |
Cluster | HCCA: Cluster_310 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00039p00226980 | evm_27.TU.AmTr_v1... | No description available | 0.05 | Archaeplastida | |
Cre16.g670300 | No alias | No description available | 0.01 | Archaeplastida | |
GSVIVT01021383001 | No alias | No description available | 0.03 | Archaeplastida | |
GSVIVT01028421001 | No alias | No description available | 0.03 | Archaeplastida | |
GSVIVT01028422001 | No alias | No description available | 0.02 | Archaeplastida | |
GSVIVT01028423001 | No alias | No description available | 0.04 | Archaeplastida | |
LOC_Os03g11200.1 | No alias | pre-mRNA-processing protein (PRP39) | 0.05 | Archaeplastida | |
LOC_Os08g29124.1 | No alias | pre-mRNA-processing protein (PRP39) | 0.02 | Archaeplastida | |
MA_6626g0010 | No alias | pre-mRNA-processing protein (PRP39) | 0.04 | Archaeplastida | |
Mp6g00560.1 | No alias | pre-mRNA-processing protein (PRP39) | 0.03 | Archaeplastida | |
Pp3c2_14560V3.1 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
Smo109541 | No alias | Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000775 | chromosome, centromeric region | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Neighborhood |
MF | GO:0005047 | signal recognition particle binding | IEP | Neighborhood |
MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
CC | GO:0005685 | U1 snRNP | IEP | Neighborhood |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Neighborhood |
BP | GO:0006376 | mRNA splice site selection | IEP | Neighborhood |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Neighborhood |
BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Neighborhood |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006605 | protein targeting | IEP | Neighborhood |
BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
BP | GO:0008104 | protein localization | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010921 | regulation of phosphatase activity | IEP | Neighborhood |
BP | GO:0015031 | protein transport | IEP | Neighborhood |
BP | GO:0015833 | peptide transport | IEP | Neighborhood |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0016255 | attachment of GPI anchor to protein | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
MF | GO:0019902 | phosphatase binding | IEP | Neighborhood |
MF | GO:0019903 | protein phosphatase binding | IEP | Neighborhood |
BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Neighborhood |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0031399 | regulation of protein modification process | IEP | Neighborhood |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
MF | GO:0033218 | amide binding | IEP | Neighborhood |
BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0035303 | regulation of dephosphorylation | IEP | Neighborhood |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
MF | GO:0042277 | peptide binding | IEP | Neighborhood |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Neighborhood |
CC | GO:0042765 | GPI-anchor transamidase complex | IEP | Neighborhood |
BP | GO:0042886 | amide transport | IEP | Neighborhood |
MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
BP | GO:0045047 | protein targeting to ER | IEP | Neighborhood |
BP | GO:0045132 | meiotic chromosome segregation | IEP | Neighborhood |
BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Neighborhood |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Neighborhood |
BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
CC | GO:0048500 | signal recognition particle | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051336 | regulation of hydrolase activity | IEP | Neighborhood |
BP | GO:0051641 | cellular localization | IEP | Neighborhood |
BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Neighborhood |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Neighborhood |
BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0098687 | chromosomal region | IEP | Neighborhood |
BP | GO:0098813 | nuclear chromosome segregation | IEP | Neighborhood |
MF | GO:0106073 | dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |