AT3G07540

Description : Actin-binding FH2 (formin homology 2) family protein

Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0025148 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07540
Cluster	HCCA: Cluster_190

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00097480	evm_27.TU.AmTr_v1...	Cytoskeleton.microfilament network.actin...	0.04	Archaeplastida
GSVIVT01038194001	No alias	Cytoskeleton.microfilament network.actin...	0.04	Archaeplastida
LOC_Os01g67240.1	No alias	group-I formin actin filament elongation factor	0.04	Archaeplastida
LOC_Os02g50570.1	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
LOC_Os07g36150.1	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
LOC_Os09g34180.1	No alias	group-I formin actin filament elongation factor	0.1	Archaeplastida
LOC_Os10g20710.1	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
Mp5g03400.1	No alias	group-I formin actin filament elongation factor	0.05	Archaeplastida
Solyc02g092470.3.1	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
Solyc12g019480.3.1	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
Zm00001e007899_P001	No alias	group-I formin actin filament elongation factor	0.04	Archaeplastida
Zm00001e010169_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e012597_P001	No alias	group-I formin actin filament elongation factor	0.07	Archaeplastida
Zm00001e015771_P001	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
Zm00001e028560_P002	No alias	group-I formin actin filament elongation factor	0.05	Archaeplastida
Zm00001e034711_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e038766_P001	No alias	group-I formin actin filament elongation factor	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010073	meristem maintenance	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0000578	embryonic axis specification	IEP	Neighborhood
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
BP	GO:0001763	morphogenesis of a branching structure	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0001872	(1->3)-beta-D-glucan binding	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006342	chromatin silencing	IEP	Neighborhood
BP	GO:0006346	methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006473	protein acetylation	IEP	Neighborhood
BP	GO:0006475	internal protein amino acid acetylation	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
BP	GO:0007267	cell-cell signaling	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
BP	GO:0008356	asymmetric cell division	IEP	Neighborhood
BP	GO:0009615	response to virus	IEP	Neighborhood
BP	GO:0009616	virus induced gene silencing	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009741	response to brassinosteroid	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009798	axis specification	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009942	longitudinal axis specification	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
BP	GO:0010050	vegetative phase change	IEP	Neighborhood
BP	GO:0010052	guard cell differentiation	IEP	Neighborhood
BP	GO:0010065	primary meristem tissue development	IEP	Neighborhood
BP	GO:0010067	procambium histogenesis	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010088	phloem development	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010094	specification of carpel identity	IEP	Neighborhood
BP	GO:0010158	abaxial cell fate specification	IEP	Neighborhood
BP	GO:0010223	secondary shoot formation	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
BP	GO:0010252	auxin homeostasis	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010346	shoot axis formation	IEP	Neighborhood
BP	GO:0010374	stomatal complex development	IEP	Neighborhood
MF	GO:0010385	double-stranded methylated DNA binding	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
BP	GO:0016246	RNA interference	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
BP	GO:0016441	posttranscriptional gene silencing	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
BP	GO:0016573	histone acetylation	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Neighborhood
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0022622	root system development	IEP	Neighborhood
BP	GO:0023052	signaling	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0031048	chromatin silencing by small RNA	IEP	Neighborhood
BP	GO:0031050	dsRNA fragmentation	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0035194	posttranscriptional gene silencing by RNA	IEP	Neighborhood
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	Neighborhood
BP	GO:0035821	modification of morphology or physiology of other organism	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0043966	histone H3 acetylation	IEP	Neighborhood
BP	GO:0043971	histone H3-K18 acetylation	IEP	Neighborhood
BP	GO:0043972	histone H3-K23 acetylation	IEP	Neighborhood
BP	GO:0044003	modification by symbiont of host morphology or physiology	IEP	Neighborhood
BP	GO:0044030	regulation of DNA methylation	IEP	Neighborhood
BP	GO:0044154	histone H3-K14 acetylation	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
BP	GO:0044419	interspecies interaction between organisms	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0044770	cell cycle phase transition	IEP	Neighborhood
BP	GO:0044772	mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:0044843	cell cycle G1/S phase transition	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045926	negative regulation of growth	IEP	Neighborhood
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048438	floral whorl development	IEP	Neighborhood
BP	GO:0048479	style development	IEP	Neighborhood
BP	GO:0048480	stigma development	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048508	embryonic meristem development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051607	defense response to virus	IEP	Neighborhood
BP	GO:0051701	interaction with host	IEP	Neighborhood
BP	GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052018	modulation by symbiont of RNA levels in host	IEP	Neighborhood
BP	GO:0052249	modulation of RNA levels in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:0080188	RNA-directed DNA methylation	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
BP	GO:0090558	plant epidermis development	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:0098586	cellular response to virus	IEP	Neighborhood
CC	GO:0098590	plasma membrane region	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000603	regulation of secondary growth	IEP	Neighborhood
BP	GO:2000604	negative regulation of secondary growth	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR015425	FH2_Formin	470	827

External Links

No external refs found!

AT3G07540

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation