AT3G07560 (APM2, PEX13)

Aliases : APM2, PEX13

Description : peroxin 13

Gene families : OG0004391 (Archaeplastida) Phylogenetic Tree(s): OG0004391_tree ,
OG_05_0004286 (LandPlants) Phylogenetic Tree(s): OG_05_0004286_tree ,
OG_06_0004950 (SeedPlants) Phylogenetic Tree(s): OG_06_0004950_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07560
Cluster	HCCA: Cluster_238

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c11_19790V3.1	No alias	peroxin 13	0.03	Archaeplastida
Zm00001e005915_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005778	peroxisomal membrane	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006605	protein targeting	RCA	Interproscan
BP	GO:0006625	protein targeting to peroxisome	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	IMP	Interproscan
BP	GO:0006635	fatty acid beta-oxidation	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006869	lipid transport	RCA	Interproscan
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006891	intra-Golgi vesicle-mediated transport	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007031	peroxisome organization	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010351	lithium ion transport	RCA	Interproscan
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015672	monovalent inorganic cation transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0015919	peroxisomal membrane transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016558	protein import into peroxisome matrix	IDA	Interproscan
BP	GO:0016558	protein import into peroxisome matrix	IMP	Interproscan
BP	GO:0016558	protein import into peroxisome matrix	RCA	Interproscan
BP	GO:0017038	protein import	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030258	lipid modification	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031903	microbody membrane	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
CC	GO:0042579	microbody	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043574	peroxisomal transport	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	RCA	Interproscan
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044438	microbody part	None	Extended
CC	GO:0044439	peroxisomal part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0044743	protein transmembrane import into intracellular organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055114	oxidation-reduction process	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072662	protein localization to peroxisome	None	Extended
BP	GO:0072663	establishment of protein localization to peroxisome	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098805	whole membrane	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000303	response to superoxide	IEP	Neighborhood
BP	GO:0000305	response to oxygen radical	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0004407	histone deacetylase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
CC	GO:0005795	Golgi stack	IEP	Neighborhood
BP	GO:0006104	succinyl-CoA metabolic process	IEP	Neighborhood
BP	GO:0006301	postreplication repair	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006476	protein deacetylation	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006598	polyamine catabolic process	IEP	Neighborhood
BP	GO:0006914	autophagy	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008320	protein transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
MF	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	IEP	Neighborhood
BP	GO:0009292	genetic transfer	IEP	Neighborhood
BP	GO:0009294	DNA mediated transformation	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0009629	response to gravity	IEP	Neighborhood
BP	GO:0009630	gravitropism	IEP	Neighborhood
BP	GO:0009648	photoperiodism	IEP	Neighborhood
BP	GO:0009846	pollen germination	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
BP	GO:0009970	cellular response to sulfate starvation	IEP	Neighborhood
BP	GO:0010071	root meristem specification	IEP	Neighborhood
BP	GO:0010078	maintenance of root meristem identity	IEP	Neighborhood
BP	GO:0010118	stomatal movement	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
MF	GO:0010945	CoA pyrophosphatase activity	IEP	Neighborhood
MF	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015936	coenzyme A metabolic process	IEP	Neighborhood
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Neighborhood
BP	GO:0016032	viral process	IEP	Neighborhood
BP	GO:0016575	histone deacetylation	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016794	diphosphoric monoester hydrolase activity	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
MF	GO:0019213	deacetylase activity	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Neighborhood
MF	GO:0033558	protein deacetylase activity	IEP	Neighborhood
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0035601	protein deacylation	IEP	Neighborhood
MF	GO:0035671	enone reductase activity	IEP	Neighborhood
BP	GO:0040011	locomotion	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0044000	movement in host	IEP	Neighborhood
BP	GO:0044403	symbiont process	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
BP	GO:0044766	multi-organism transport	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0046739	transport of virus in multicellular host	IEP	Neighborhood
BP	GO:0046740	transport of virus in host, cell to cell	IEP	Neighborhood
BP	GO:0046794	transport of virus	IEP	Neighborhood
BP	GO:0046909	obsolete intermembrane transport	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0048573	photoperiodism, flowering	IEP	Neighborhood
MF	GO:0051019	mitogen-activated protein kinase binding	IEP	Neighborhood
BP	GO:0051814	movement in other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0052126	movement in host environment	IEP	Neighborhood
BP	GO:0052192	movement in environment of other organism involved in symbiotic interaction	IEP	Neighborhood
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0080022	primary root development	IEP	Neighborhood
BP	GO:0090421	embryonic meristem initiation	IEP	Neighborhood
BP	GO:0098732	macromolecule deacylation	IEP	Neighborhood
BP	GO:1902579	multi-organism localization	IEP	Neighborhood
BP	GO:1902586	multi-organism intercellular transport	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G07560 (APM2, PEX13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation