Zm00001e001952_P001

Description : component TAF9 of SAGA transcription co-activator complex. component TAF9 of TFIId basal transcription regulation complex

Gene families : OG0004271 (Archaeplastida) Phylogenetic Tree(s): OG0004271_tree ,
OG_05_0006088 (LandPlants) Phylogenetic Tree(s): OG_05_0006088_tree ,
OG_06_0005421 (SeedPlants) Phylogenetic Tree(s): OG_06_0005421_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e001952_P001
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000383.29	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
Solyc04g010090.3.1	No alias	component TAF9 of SAGA transcription co-activator...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription, initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0004000	adenosine deaminase activity	IEP	Neighborhood
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006012	galactose metabolic process	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008108	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
MF	GO:0019239	deaminase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003162	TFIID-31	25	146

External Links

No external refs found!

Zm00001e001952_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation