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  5. Zm00001e004147_P001

Zm00001e004147_P001


Description : adaptor component ClpS of chloroplast Clp-type protease complex


Gene families : OG0005375 (Archaeplastida) Phylogenetic Tree(s): OG0005375_tree ,
OG_05_0007305 (LandPlants) Phylogenetic Tree(s): OG_05_0007305_tree ,
OG_06_0008223 (SeedPlants) Phylogenetic Tree(s): OG_06_0008223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004147_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00109470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
AT1G68660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Archaeplastida
Cpa|evm.model.tig00000241.124 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01008253001 No alias Protein degradation.peptidase families.serine-type... 0.07 Archaeplastida
LOC_Os08g33540.1 No alias adaptor component ClpS of chloroplast Clp-type protease complex 0.09 Archaeplastida
Pp3c20_21920V3.1 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Archaeplastida
Solyc03g119700.3.1 No alias adaptor component ClpS of chloroplast Clp-type protease complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003769 ClpS_core 116 182
No external refs found!