AT3G11520 (CYCB1;3, CYC2)


Aliases : CYCB1;3, CYC2

Description : CYCLIN B1;3


Gene families : OG0000492 (Archaeplastida) Phylogenetic Tree(s): OG0000492_tree ,
OG_05_0000357 (LandPlants) Phylogenetic Tree(s): OG_05_0000357_tree ,
OG_06_0000555 (SeedPlants) Phylogenetic Tree(s): OG_06_0000555_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11520
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.16 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.16 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
Cre08.g370401 No alias Cyclin-B2-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.17 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.15 Archaeplastida
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.19 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.14 Archaeplastida
Gb_01761 No alias cyclin (CYCB) 0.1 Archaeplastida
Gb_03506 No alias cyclin (CYCB) 0.07 Archaeplastida
Gb_10664 No alias cyclin (CYCB) 0.09 Archaeplastida
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.1 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.16 Archaeplastida
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.16 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.13 Archaeplastida
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.15 Archaeplastida
MA_10314137g0010 No alias Cyclin-B1-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10393012g0020 No alias G2/mitotic-specific cyclin-2 OS=Antirrhinum majus... 0.09 Archaeplastida
MA_10428837g0030 No alias cyclin (CYCB) 0.14 Archaeplastida
MA_10433093g0020 No alias Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.11 Archaeplastida
MA_127335g0010 No alias cyclin (CYCB) 0.07 Archaeplastida
MA_19215g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_311439g0010 No alias cyclin (CYCB) 0.05 Archaeplastida
MA_738195g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp2g00590.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.1 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.07 Archaeplastida
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.05 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.08 Archaeplastida
Solyc02g082820.3.1 No alias cyclin (CYCB) 0.05 Archaeplastida
Solyc03g032190.3.1 No alias cyclin (CYCB) 0.09 Archaeplastida
Solyc04g081660.3.1 No alias Cyclin-B2-4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g082430.3.1 No alias cyclin (CYCB) 0.05 Archaeplastida
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.06 Archaeplastida
Solyc10g078330.2.1 No alias cyclin (CYCB) 0.05 Archaeplastida
Zm00001e007244_P001 No alias cyclin (CYCB) 0.13 Archaeplastida
Zm00001e019528_P002 No alias cyclin (CYCB) 0.11 Archaeplastida
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e027336_P001 No alias cyclin (CYCB) 0.06 Archaeplastida
Zm00001e028899_P002 No alias cyclin (CYCB) 0.15 Archaeplastida
Zm00001e030146_P001 No alias cyclin (CYCB) 0.04 Archaeplastida
Zm00001e041485_P001 No alias cyclin (CYCB) 0.12 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0010583 response to cyclopentenone IEP Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0051225 spindle assembly RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP Neighborhood
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
CC GO:0000794 condensed nuclear chromosome IEP Neighborhood
BP GO:0001578 microtubule bundle formation IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004076 biotin synthase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005828 kinetochore microtubule IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006768 biotin metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007088 regulation of mitotic nuclear division IEP Neighborhood
BP GO:0007093 mitotic cell cycle checkpoint IEP Neighborhood
BP GO:0007094 mitotic spindle assembly checkpoint IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
BP GO:0007135 meiosis II IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007142 male meiosis II IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008710 8-amino-7-oxononanoate synthase activity IEP Neighborhood
BP GO:0009102 biotin biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
CC GO:0009574 preprophase band IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009652 thigmotropism IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
BP GO:0010376 stomatal complex formation IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
MF GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0022403 cell cycle phase IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0031577 spindle checkpoint IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033045 regulation of sister chromatid segregation IEP Neighborhood
BP GO:0033046 negative regulation of sister chromatid segregation IEP Neighborhood
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Neighborhood
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0044848 biological phase IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045839 negative regulation of mitotic nuclear division IEP Neighborhood
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Neighborhood
BP GO:0045930 negative regulation of mitotic cell cycle IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051192 prosthetic group binding IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051322 anaphase IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051784 negative regulation of nuclear division IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051983 regulation of chromosome segregation IEP Neighborhood
BP GO:0051985 negative regulation of chromosome segregation IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0061062 regulation of nematode larval development IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0061983 meiosis II cell cycle process IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071173 spindle assembly checkpoint IEP Neighborhood
BP GO:0071174 mitotic spindle checkpoint IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
BP GO:1901988 negative regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Neighborhood
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:1905818 regulation of chromosome separation IEP Neighborhood
BP GO:1905819 negative regulation of chromosome separation IEP Neighborhood
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Neighborhood
BP GO:2001251 negative regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 167 286
IPR004367 Cyclin_C-dom 289 404
No external refs found!