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  5. Zm00001e005813_P001

Zm00001e005813_P001


Description : assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II)


Gene families : OG0007152 (Archaeplastida) Phylogenetic Tree(s): OG0007152_tree ,
OG_05_0009050 (LandPlants) Phylogenetic Tree(s): OG_05_0009050_tree ,
OG_06_0010061 (SeedPlants) Phylogenetic Tree(s): OG_06_0010061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005813_P001
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00156080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.1 Archaeplastida
AT1G49380 No alias cytochrome c biogenesis protein family 0.07 Archaeplastida
Cre13.g575000 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 Archaeplastida
GSVIVT01031911001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.1 Archaeplastida
Gb_26769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 Archaeplastida
MA_10434753g0010 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 Archaeplastida
Mp3g21290.1 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 Archaeplastida
Pp3c5_6360V3.1 No alias cytochrome c biogenesis protein family 0.07 Archaeplastida
Smo52887 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 Archaeplastida
Solyc10g051200.2.1 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 381 524
IPR007816 ResB-like_domain 110 375
No external refs found!