Coexpression cluster: Cluster_268 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 10.29% (7/68) 3.7 1e-06 0.000231
GO:0010207 photosystem II assembly 2.94% (2/68) 7.45 5.5e-05 0.005341
GO:1990904 ribonucleoprotein complex 7.35% (5/68) 3.19 0.000227 0.007331
GO:0044444 cytoplasmic part 8.82% (6/68) 2.7 0.000323 0.007828
GO:0009059 macromolecule biosynthetic process 8.82% (6/68) 2.82 0.000211 0.008196
GO:0003746 translation elongation factor activity 2.94% (2/68) 6.26 0.000312 0.008637
GO:0006414 translational elongation 2.94% (2/68) 6.56 0.000203 0.009856
GO:0008135 translation factor activity, RNA binding 4.41% (3/68) 4.77 0.000186 0.012027
GO:0043229 intracellular organelle 7.35% (5/68) 2.29 0.003614 0.021911
GO:0043226 organelle 7.35% (5/68) 2.29 0.003614 0.021911
GO:0043604 amide biosynthetic process 5.88% (4/68) 2.89 0.002152 0.021975
GO:0034641 cellular nitrogen compound metabolic process 10.29% (7/68) 2.03 0.001606 0.022258
GO:0043228 non-membrane-bounded organelle 5.88% (4/68) 2.9 0.002082 0.022444
GO:0043232 intracellular non-membrane-bounded organelle 5.88% (4/68) 2.9 0.002082 0.022444
GO:0006518 peptide metabolic process 5.88% (4/68) 2.9 0.002082 0.022444
GO:0009987 cellular process 20.59% (14/68) 1.21 0.002318 0.022484
GO:0043603 cellular amide metabolic process 5.88% (4/68) 2.83 0.002473 0.022845
GO:0034622 cellular protein-containing complex assembly 2.94% (2/68) 4.37 0.004246 0.022884
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.94% (2/68) 4.37 0.004246 0.022884
GO:0016859 cis-trans isomerase activity 2.94% (2/68) 4.37 0.004246 0.022884
GO:0004812 aminoacyl-tRNA ligase activity 2.94% (2/68) 4.5 0.00357 0.023088
GO:0043038 amino acid activation 2.94% (2/68) 4.5 0.00357 0.023088
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.94% (2/68) 4.5 0.00357 0.023088
GO:0043039 tRNA aminoacylation 2.94% (2/68) 4.5 0.00357 0.023088
GO:0000413 protein peptidyl-prolyl isomerization 2.94% (2/68) 5.09 0.001602 0.023906
GO:0018208 peptidyl-proline modification 2.94% (2/68) 5.09 0.001602 0.023906
GO:0003676 nucleic acid binding 13.24% (9/68) 1.6 0.002749 0.024243
GO:0046422 violaxanthin de-epoxidase activity 1.47% (1/68) 8.26 0.003268 0.024388
GO:0043043 peptide biosynthetic process 5.88% (4/68) 2.93 0.001904 0.024628
GO:0018193 peptidyl-amino acid modification 2.94% (2/68) 4.28 0.004827 0.024642
GO:0065003 protein-containing complex assembly 2.94% (2/68) 4.26 0.004977 0.024758
GO:0044424 intracellular part 10.29% (7/68) 1.75 0.004741 0.024858
GO:0015979 photosynthesis 2.94% (2/68) 4.23 0.00513 0.02488
GO:1901576 organic substance biosynthetic process 8.82% (6/68) 1.97 0.004245 0.024956
GO:0044249 cellular biosynthetic process 8.82% (6/68) 2.05 0.003248 0.025207
GO:0044271 cellular nitrogen compound biosynthetic process 7.35% (5/68) 2.34 0.003126 0.025266
GO:0006418 tRNA aminoacylation for protein translation 2.94% (2/68) 4.61 0.003069 0.025888
GO:0034645 cellular macromolecule biosynthetic process 7.35% (5/68) 2.65 0.001217 0.026232
GO:0005840 ribosome 5.88% (4/68) 3.05 0.001416 0.027463
GO:0051540 metal cluster binding 2.94% (2/68) 4.05 0.006599 0.027829
GO:0051536 iron-sulfur cluster binding 2.94% (2/68) 4.05 0.006599 0.027829
GO:0044237 cellular metabolic process 19.12% (13/68) 1.34 0.001581 0.02788
GO:0044464 cell part 10.29% (7/68) 1.69 0.005898 0.027908
GO:0035596 methylthiotransferase activity 1.47% (1/68) 7.26 0.006526 0.028776
GO:0050497 transferase activity, transferring alkylthio groups 1.47% (1/68) 7.26 0.006526 0.028776
GO:0009058 biosynthetic process 8.82% (6/68) 1.85 0.006497 0.030009
GO:0022607 cellular component assembly 2.94% (2/68) 3.97 0.007306 0.030156
GO:0043933 protein-containing complex subunit organization 2.94% (2/68) 3.95 0.007488 0.030263
GO:0140101 catalytic activity, acting on a tRNA 2.94% (2/68) 3.92 0.007858 0.031109
GO:0002161 aminoacyl-tRNA editing activity 1.47% (1/68) 6.93 0.008151 0.031628
GO:0006399 tRNA metabolic process 2.94% (2/68) 3.83 0.008818 0.033542
GO:0009507 chloroplast 1.47% (1/68) 6.67 0.009774 0.035776
GO:0009536 plastid 1.47% (1/68) 6.67 0.009774 0.035776
GO:0043170 macromolecule metabolic process 14.71% (10/68) 1.19 0.011489 0.041276
GO:1901566 organonitrogen compound biosynthetic process 5.88% (4/68) 2.16 0.012364 0.043611
GO:0051539 4 iron, 4 sulfur cluster binding 1.47% (1/68) 6.09 0.014625 0.048091
GO:0016874 ligase activity 2.94% (2/68) 3.41 0.015341 0.048789
GO:0034660 ncRNA metabolic process 2.94% (2/68) 3.45 0.014593 0.048812
GO:0032991 protein-containing complex 7.35% (5/68) 1.81 0.014115 0.048898
GO:0003735 structural constituent of ribosome 4.41% (3/68) 2.54 0.015151 0.048989
GO:0006412 translation 4.41% (3/68) 2.56 0.014525 0.049435
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_34 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.05 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_102 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.055 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.123 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.094 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.063 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.034 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_2 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_95 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.057 Archaeplastida Compare
Gingko biloba HCCA Cluster_92 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_339 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.078 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.065 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.095 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.09 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_27 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_145 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.045 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.073 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_446 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.117 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.086 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.067 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.038 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.038 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_173 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.054 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.074 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.046 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.062 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.065 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.065 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.095 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.034 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_1 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.041 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.041 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.062 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.028 Archaeplastida Compare
Sequences (68) (download table)

InterPro Domains

GO Terms

Family Terms