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  5. Zm00001e006644_P002

Zm00001e006644_P002


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006644_P002
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00012p00149750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00023p00181320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.07 Archaeplastida
AT3G03660 WOX11 WUSCHEL related homeobox 11 0.03 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.04 Archaeplastida
AT5G05770 WOX7 WUSCHEL related homeobox 7 0.03 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01025075001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01029942001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
LOC_Os01g62310.1 No alias transcription factor (WOX) 0.04 Archaeplastida
LOC_Os01g63510.1 No alias transcription factor (WOX) 0.04 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.07 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.07 Archaeplastida
MA_10234279g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_42637g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_747816g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_8850184g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_921642g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc02g077390.2.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc04g078650.4.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc06g072890.3.1 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Solyc11g072770.2.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e019245_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e028720_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e035891_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e038272_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e041785_P001 No alias transcription factor (WOX) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 39 99
No external refs found!