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  5. Zm00001e006942_P002

Zm00001e006942_P002


Description : APO protein 1, chloroplastic OS=Arabidopsis thaliana (sp|q9xir4|apo1_arath : 481.0)


Gene families : OG0000992 (Archaeplastida) Phylogenetic Tree(s): OG0000992_tree ,
OG_05_0001157 (LandPlants) Phylogenetic Tree(s): OG_05_0001157_tree ,
OG_06_0003046 (SeedPlants) Phylogenetic Tree(s): OG_06_0003046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006942_P002
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00027190 evm_27.TU.AmTr_v1... APO protein 2, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01018392001 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023615001 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os04g52520.4 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10433857g0010 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003919 FMN adenylyltransferase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023342 APO_dom 53 247
IPR023342 APO_dom 288 409
No external refs found!