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  5. Zm00001e007108_P001

Zm00001e007108_P001


Description : No annotation


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0000097 (LandPlants) Phylogenetic Tree(s): OG_05_0000097_tree ,
OG_06_0000440 (SeedPlants) Phylogenetic Tree(s): OG_06_0000440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007108_P001
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00199950 evm_27.TU.AmTr_v1... U-box domain-containing protein 31 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00030p00130440 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00030p00159240 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00030p00161650 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00069p00038840 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00149p00072640 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G66160 CMPG1, ATCMPG1 CYS, MET, PRO, and GLY protein 1 0.02 Archaeplastida
AT3G02840 No alias ARM repeat superfamily protein 0.04 Archaeplastida
AT3G52450 PUB22 plant U-box 22 0.07 Archaeplastida
AT5G37490 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.05 Archaeplastida
GSVIVT01006112001 No alias U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01011139001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01011140001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01011616001 No alias U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01026542001 No alias U-box domain-containing protein 27 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031720001 No alias U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_02490 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Gb_02627 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.05 Archaeplastida
Gb_02633 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Gb_02635 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Gb_13090 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
Gb_16227 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
Gb_16228 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Gb_17119 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 Archaeplastida
Gb_19502 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.05 Archaeplastida
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Gb_29851 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os01g64570.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os02g33680.1 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g34410.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g50460.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g13740.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g34030.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os04g49970.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os04g58920.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g13870.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os08g04470.1 No alias U-box domain-containing protein 8 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os10g03440.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.02 Archaeplastida
MA_10430196g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
MA_10432813g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.07 Archaeplastida
MA_126399g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.05 Archaeplastida
MA_1663g0020 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 Archaeplastida
MA_17715g0010 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.04 Archaeplastida
MA_311559g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 Archaeplastida
MA_33190g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
MA_3784951g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_415344g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
MA_5536318g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_58844g0020 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
MA_6335g0010 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
MA_779502g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
MA_83739g0020 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.04 Archaeplastida
MA_84154g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 Archaeplastida
MA_8837995g0010 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g06090.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Mp3g22740.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Mp7g11000.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 Archaeplastida
Mp7g11020.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Pp3c10_20630V3.1 No alias plant U-box 22 0.02 Archaeplastida
Pp3c4_6500V3.1 No alias plant U-box 22 0.02 Archaeplastida
Smo104879 No alias U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.05 Archaeplastida
Smo172230 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo416356 No alias U-box domain-containing protein 30 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo426053 No alias U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g005160.4.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g007000.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g007010.2.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g007030.3.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 Archaeplastida
Solyc01g007050.3.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g009330.1.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g080920.3.1 No alias No annotation 0.04 Archaeplastida
Solyc01g107980.3.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g008100.3.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g071030.1.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Solyc06g074140.1.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g006030.1.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g068920.1.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g068940.1.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e002598_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e008167_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e014752_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e014766_P001 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
Zm00001e014779_P001 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e015763_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e022698_P001 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e036030_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e039417_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!