AT3G13510


Description : Protein of Unknown Function (DUF239)


Gene families : OG0000377 (Archaeplastida) Phylogenetic Tree(s): OG0000377_tree ,
OG_05_0000243 (LandPlants) Phylogenetic Tree(s): OG_05_0000243_tree ,
OG_06_0001441 (SeedPlants) Phylogenetic Tree(s): OG_06_0001441_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13510
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00062100 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00120p00051630 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01026331001 No alias No description available 0.03 Archaeplastida
GSVIVT01035338001 No alias No description available 0.02 Archaeplastida
Gb_36043 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g07570.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g36660.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g59240.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g07764.2 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g10530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g38590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c6_29500V3.1 No alias Protein of Unknown Function (DUF239) 0.03 Archaeplastida
Smo103932 No alias No description available 0.03 Archaeplastida
Smo438522 No alias No description available 0.04 Archaeplastida
Smo92536 No alias No description available 0.03 Archaeplastida
Solyc01g081570.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g071590.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g070080.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g070090.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006081_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020747_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033077_P002 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006346 methylation-dependent chromatin silencing RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0009813 flavonoid biosynthetic process RCA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0010073 meristem maintenance RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0010224 response to UV-B RCA Interproscan
BP GO:0016246 RNA interference RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048519 negative regulation of biological process RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006268 DNA unwinding involved in DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
MF GO:0008381 mechanosensitive ion channel activity IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0010058 regulation of atrichoblast fate specification IEP Neighborhood
BP GO:0010059 positive regulation of atrichoblast fate specification IEP Neighborhood
BP GO:0010061 regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010063 positive regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010071 root meristem specification IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010358 leaf shaping IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP Neighborhood
MF GO:0010428 methyl-CpNpG binding IEP Neighborhood
MF GO:0010429 methyl-CpNpN binding IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010455 positive regulation of cell fate commitment IEP Neighborhood
BP GO:0010586 miRNA metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031055 chromatin remodeling at centromere IEP Neighborhood
BP GO:0031497 chromatin assembly IEP Neighborhood
BP GO:0031507 heterochromatin assembly IEP Neighborhood
BP GO:0031508 pericentric heterochromatin assembly IEP Neighborhood
BP GO:0031935 regulation of chromatin silencing IEP Neighborhood
BP GO:0031937 positive regulation of chromatin silencing IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032392 DNA geometric change IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0032508 DNA duplex unwinding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032776 DNA methylation on cytosine IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035019 somatic stem cell population maintenance IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
MF GO:0035198 miRNA binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0042659 regulation of cell fate specification IEP Neighborhood
BP GO:0042660 positive regulation of cell fate specification IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0045177 apical part of cell IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048826 cotyledon morphogenesis IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050982 detection of mechanical stimulus IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070828 heterochromatin organization IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090308 regulation of methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0090309 positive regulation of methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0090421 embryonic meristem initiation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902183 regulation of shoot apical meristem development IEP Neighborhood
BP GO:1902275 regulation of chromatin organization IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903888 regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1903890 positive regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:1905421 regulation of plant organ morphogenesis IEP Neighborhood
BP GO:1905423 positive regulation of plant organ morphogenesis IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000067 regulation of root morphogenesis IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 55 177
IPR004314 Neprosin 190 412
No external refs found!