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  5. Zm00001e007720_P001

Zm00001e007720_P001


Description : transcription factor (BBX-DBB)


Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0000694 (LandPlants) Phylogenetic Tree(s): OG_05_0000694_tree ,
OG_06_0006215 (SeedPlants) Phylogenetic Tree(s): OG_06_0006215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007720_P001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00204180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G78600 LZF1, STH3, DBB3 light-regulated zinc finger protein 1 0.03 Archaeplastida
AT4G10240 No alias B-box zinc finger family protein 0.05 Archaeplastida
AT4G38960 No alias B-box type zinc finger family protein 0.02 Archaeplastida
AT4G39070 No alias B-box zinc finger family protein 0.02 Archaeplastida
Gb_35653 No alias B-box zinc finger protein 18 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g39360.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
LOC_Os04g41560.2 No alias transcription factor (BBX-DBB) 0.05 Archaeplastida
LOC_Os04g45690.1 No alias transcription factor (BBX-DBB) 0.02 Archaeplastida
LOC_Os06g49880.1 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida
LOC_Os09g35880.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
LOC_Os12g10660.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Solyc12g089240.2.1 No alias transcription factor (BBX-DBB) 0.03 Archaeplastida
Zm00001e041335_P001 No alias transcription factor (BBX-DBB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000315 Znf_B-box 58 98
No external refs found!