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  5. Zm00001e007868_P001

Zm00001e007868_P001


Description : component FtsHi of protein translocation ATPase motor complex


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0006625 (LandPlants) Phylogenetic Tree(s): OG_05_0006625_tree ,
OG_06_0006523 (SeedPlants) Phylogenetic Tree(s): OG_06_0006523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007868_P001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00232760 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
AMTR_s00006p00260320 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
AMTR_s00021p00235220 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
AMTR_s00056p00047160 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
AMTR_s00106p00108310 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.06 Archaeplastida
AT3G02450 No alias cell division protein ftsH, putative 0.14 Archaeplastida
AT3G16290 EMB2083 AAA-type ATPase family protein 0.05 Archaeplastida
AT4G23940 No alias FtsH extracellular protease family 0.07 Archaeplastida
Cpa|evm.model.tig00021179.74 No alias ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.02 Archaeplastida
Cpa|evm.model.tig00022075.42 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.02 Archaeplastida
Cre03.g201100 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
Cre07.g352350 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.01 Archaeplastida
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
GSVIVT01017029001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
GSVIVT01019239001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.08 Archaeplastida
GSVIVT01020760001 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
GSVIVT01036484001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.11 Archaeplastida
Gb_20809 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28961 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida
Gb_32360 No alias component FtsHi of protein translocation ATPase motor complex 0.11 Archaeplastida
LOC_Os04g39190.1 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida
MA_10435856g0010 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.05 Archaeplastida
MA_188257g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_98203g0010 No alias No annotation 0.04 Archaeplastida
Mp3g08790.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida
Mp6g01370.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.07 Archaeplastida
Mp6g15080.1 No alias component FtsHi of protein translocation ATPase motor complex 0.06 Archaeplastida
Pp3c17_20370V3.1 No alias AAA-type ATPase family protein 0.07 Archaeplastida
Pp3c19_2770V3.1 No alias FtsH extracellular protease family 0.03 Archaeplastida
Pp3c20_15780V3.1 No alias FtsH extracellular protease family 0.04 Archaeplastida
Pp3c22_8480V3.1 No alias FtsH extracellular protease family 0.05 Archaeplastida
Pp3c23_14665V3.1 No alias FtsH extracellular protease family 0.05 Archaeplastida
Pp3c4_20860V3.1 No alias cell division protein ftsH, putative 0.04 Archaeplastida
Smo152929 No alias Protein degradation.peptidase families.metallopeptidase... 0.07 Archaeplastida
Smo166773 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.05 Archaeplastida
Smo98591 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
Solyc03g046340.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.09 Archaeplastida
Solyc07g055320.4.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
Solyc08g082530.4.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.13 Archaeplastida
Solyc12g044400.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 327 456
No external refs found!