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  5. Zm00001e008748_P001

Zm00001e008748_P001


Description : Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica (sp|q5ks50|nph3_orysj : 556.0)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0003027 (LandPlants) Phylogenetic Tree(s): OG_05_0003027_tree ,
OG_06_0011854 (SeedPlants) Phylogenetic Tree(s): OG_06_0011854_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e008748_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00139490 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00137p00096710 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT2G23050 NPY4 Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.06 Archaeplastida
AT3G50840 No alias Phototropic-responsive NPH3 family protein 0.05 Archaeplastida
AT4G37590 NPY5 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT5G47800 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT5G48130 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
GSVIVT01006403001 No alias BTB/POZ domain-containing protein At3g22104... 0.05 Archaeplastida
GSVIVT01024541001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01029878001 No alias BTB/POZ domain-containing protein At3g08570... 0.04 Archaeplastida
LOC_Os03g10880.1 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
LOC_Os04g40100.1 No alias BTB/POZ domain-containing protein At1g67900... 0.06 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
LOC_Os05g12030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os12g02530.2 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_448959g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_479907g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Pp3c10_19380V3.1 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
Pp3c11_23370V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Solyc02g079860.1.1 No alias BTB/POZ domain-containing protein At3g22104... 0.04 Archaeplastida
Solyc05g051580.3.1 No alias BTB/POZ domain-containing protein DOT3 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc07g052970.3.1 No alias BTB/POZ domain-containing protein At3g22104... 0.04 Archaeplastida
Zm00001e006815_P001 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
Zm00001e019629_P002 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
Zm00001e035189_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035388_P001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
Zm00001e036310_P001 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 243 512
No external refs found!