Zm00001e009225_P003

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009225_P003
Cluster	HCCA: Cluster_168

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00065p00077750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00202p00017170	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AT1G51190	PLT2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G17430	BBM	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
GSVIVT01002536001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01019049001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01023697001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01027345001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_11937	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_18560	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_24420	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_39931	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_41702	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os12g03290.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_639835g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc01g096860.3.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc05g051380.4.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e019489_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0052646	alditol phosphate metabolic process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	166	217
IPR001471	AP2/ERF_dom	63	123

External Links

No external refs found!

Zm00001e009225_P003

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation