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  5. Zm00001e012060_P001

Zm00001e012060_P001


Description : component Sec23 of Sec23/24 cargo adaptor subcomplex


Gene families : OG0001193 (Archaeplastida) Phylogenetic Tree(s): OG0001193_tree ,
OG_05_0001066 (LandPlants) Phylogenetic Tree(s): OG_05_0001066_tree ,
OG_06_0008561 (SeedPlants) Phylogenetic Tree(s): OG_06_0008561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012060_P001
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AT4G14160 No alias Sec23/Sec24 protein transport family protein 0.04 Archaeplastida
Cpa|evm.model.tig00001408.15 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
GSVIVT01018103001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
Gb_40586 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
LOC_Os03g53140.2 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
LOC_Os08g36994.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
LOC_Os09g28610.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Pp3c6_940V3.1 No alias Sec23/Sec24 protein transport family protein 0.02 Archaeplastida
Smo107900 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Solyc01g081070.3.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 56 94
IPR007123 Gelsolin-like_dom 625 711
IPR006896 Sec23/24_trunk_dom 127 389
IPR012990 Sec23_24_beta_S 399 499
IPR006900 Sec23/24_helical_dom 511 606
No external refs found!