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  5. Zm00001e012388_P001

Zm00001e012388_P001


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0029897 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0028424 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012388_P001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00047p00199030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.02 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc07g008180.4.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.1 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 12 79
No external refs found!