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  5. AT3G18990

AT3G18990 (VRN1, REM39)


Aliases : VRN1, REM39

Description : AP2/B3-like transcriptional factor family protein


Gene families : OG0014094 (Archaeplastida) Phylogenetic Tree(s): OG0014094_tree ,
OG_05_0014031 (LandPlants) Phylogenetic Tree(s): OG_05_0014031_tree ,
OG_06_0017049 (SeedPlants) Phylogenetic Tree(s): OG_06_0017049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18990
Cluster HCCA: Cluster_193


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005654 nucleoplasm IDA Interproscan
BP GO:0009909 regulation of flower development IMP Interproscan
BP GO:0010048 vernalization response IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000781 chromosome, telomeric region IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP Neighborhood
MF GO:0004864 protein phosphatase inhibitor activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP Neighborhood
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP Neighborhood
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006491 N-glycan processing IEP Neighborhood
BP GO:0006493 protein O-linked glycosylation IEP Neighborhood
BP GO:0006517 protein deglycosylation IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007163 establishment or maintenance of cell polarity IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015783 GDP-fucose transmembrane transport IEP Neighborhood
BP GO:0015786 UDP-glucose transmembrane transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019212 phosphatase inhibitor activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030010 establishment of cell polarity IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Neighborhood
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0043132 NAD transport IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0048358 mucilage pectin biosynthetic process IEP Neighborhood
BP GO:0048363 mucilage pectin metabolic process IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0051182 coenzyme transport IEP Neighborhood
MF GO:0051184 cofactor transmembrane transporter activity IEP Neighborhood
MF GO:0051185 coenzyme transmembrane transporter activity IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0051724 NAD transmembrane transporter activity IEP Neighborhood
BP GO:0051924 regulation of calcium ion transport IEP Neighborhood
BP GO:0051928 positive regulation of calcium ion transport IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
MF GO:0052742 phosphatidylinositol kinase activity IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0071216 cellular response to biotic stimulus IEP Neighborhood
BP GO:0071219 cellular response to molecule of bacterial origin IEP Neighborhood
BP GO:0071323 cellular response to chitin IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0072334 UDP-galactose transmembrane transport IEP Neighborhood
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP Neighborhood
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Neighborhood
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 5 96
IPR003340 B3_DNA-bd 244 337
No external refs found!