Description : Protodermal factor 1 OS=Arabidopsis thaliana (sp|q9s728|pdf1_arath : 100.0)
Gene families : OG0001668 (Archaeplastida) Phylogenetic Tree(s): OG0001668_tree ,
OG_05_0001072 (LandPlants) Phylogenetic Tree(s): OG_05_0001072_tree ,
OG_06_0004253 (SeedPlants) Phylogenetic Tree(s): OG_06_0004253_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e014410_P001 | |
Cluster | HCCA: Cluster_197 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00160960 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
AMTR_s00067p00030870 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
AMTR_s00068p00158450 | evm_27.TU.AmTr_v1... | Protodermal factor 1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
AMTR_s00858p00001360 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
AT2G42840 | PDF1 | protodermal factor 1 | 0.02 | Archaeplastida | |
Gb_40194 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os01g52690.1 | No alias | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
LOC_Os02g13660.1 | No alias | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
LOC_Os06g35970.1 | No alias | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
MA_111671g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Mp3g03900.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Mp3g10620.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Mp4g22090.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Pp3c7_3869V3.1 | No alias | No annotation | 0.05 | Archaeplastida | |
Smo437656 | No alias | No description available | 0.03 | Archaeplastida | |
Solyc12g011010.2.1 | No alias | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Zm00001e016528_P003 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e030674_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Zm00001e030749_P002 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006417 | regulation of translation | IEP | Neighborhood |
BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006952 | defense response | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Neighborhood |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
BP | GO:0017148 | negative regulation of translation | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
MF | GO:0030597 | RNA glycosylase activity | IEP | Neighborhood |
MF | GO:0030598 | rRNA N-glycosylase activity | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0032269 | negative regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Neighborhood |
BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |