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  5. AT3G19620

AT3G19620


Description : Glycosyl hydrolase family protein


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0001017 (SeedPlants) Phylogenetic Tree(s): OG_06_0001017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19620

Target Alias Description ECC score Gene Family Method Actions
AT1G78060 No alias Glycosyl hydrolase family protein 0.05 Archaeplastida
GSVIVT01017658001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01017660001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01028104001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01035033001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Gb_32463 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Gb_34864 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
LOC_Os01g19220.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
LOC_Os11g18730.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.06 Archaeplastida
MA_102349g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
Smo419541 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Solyc01g079570.3.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
Solyc10g047030.3.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Zm00001e007432_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida
Zm00001e026163_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037605_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009835 fruit ripening IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0031537 regulation of anthocyanin metabolic process IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
MF GO:0042299 lupeol synthase activity IEP Neighborhood
MF GO:0042300 beta-amyrin synthase activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
MF GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
MF GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
MF GO:0080104 5-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
MF GO:0080106 7-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 397 628
IPR026891 Fn3-like 686 761
IPR001764 Glyco_hydro_3_N 108 348
No external refs found!