Zm00001e016135_P001


Description : no hits & (original description: none)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0015180 (SeedPlants) Phylogenetic Tree(s): OG_06_0015180_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016135_P001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT2G15580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G13430 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Archaeplastida
AT3G51325 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.07 Archaeplastida
GSVIVT01015309001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01024920001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_30381 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.02 Archaeplastida
LOC_Os01g44240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g74040.1 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.04 Archaeplastida
LOC_Os03g16480.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g20870.1 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.03 Archaeplastida
LOC_Os06g01200.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 Archaeplastida
LOC_Os08g36170.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g38060.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g37230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_3413240g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_63700g0010 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.01 Archaeplastida
MA_8499g0020 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp8g17140.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_42450V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c2_5960V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc05g018050.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.05 Archaeplastida
Solyc08g067290.3.1 No alias AIP2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc12g008440.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024455_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038273_P001 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 68 110
No external refs found!