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  5. Zm00001e017155_P001

Zm00001e017155_P001


Description : Protein RER1A OS=Arabidopsis thaliana (sp|o48670|rer1a_arath : 224.0)


Gene families : OG0001249 (Archaeplastida) Phylogenetic Tree(s): OG0001249_tree ,
OG_05_0001860 (LandPlants) Phylogenetic Tree(s): OG_05_0001860_tree ,
OG_06_0001876 (SeedPlants) Phylogenetic Tree(s): OG_06_0001876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017155_P001
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00228520 evm_27.TU.AmTr_v1... Protein RER1B OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00051p00210110 evm_27.TU.AmTr_v1... Protein RER1A OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G23310 ATRER1C1 Rer1 family protein 0.05 Archaeplastida
AT4G39220 ATRER1A Rer1 family protein 0.05 Archaeplastida
Cre12.g555350 No alias Protein RER1C OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os01g01640.1 No alias Protein RER1A OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os06g49460.1 No alias Protein RER1A OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g21760.1 No alias Protein RER1A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g00750.1 No alias Protein RER1A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo171760 No alias Protein RER1A OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g109770.3.1 No alias Protein RER1B OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004932 Rer1 23 188
No external refs found!