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  5. AT3G24800

AT3G24800 (PRT1)


Aliases : PRT1

Description : proteolysis 1


Gene families : OG0003793 (Archaeplastida) Phylogenetic Tree(s): OG0003793_tree ,
OG_05_0005880 (LandPlants) Phylogenetic Tree(s): OG_05_0005880_tree ,
OG_06_0009430 (SeedPlants) Phylogenetic Tree(s): OG_06_0009430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24800
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre02.g098200 No alias Protein degradation.N-end rule pathway of targeted... 0.01 Archaeplastida
GSVIVT01028643001 No alias Protein degradation.N-end rule pathway of targeted... 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex TAS Interproscan
MF GO:0004842 ubiquitin-protein transferase activity TAS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000578 embryonic axis specification IEP Neighborhood
BP GO:0002229 defense response to oomycetes IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003691 double-stranded telomeric DNA binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009560 embryo sac egg cell differentiation IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
MF GO:0030371 translation repressor activity IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
BP GO:0033238 regulation of cellular amine metabolic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034635 glutathione transport IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035864 response to potassium ion IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
BP GO:0042939 tripeptide transport IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP Neighborhood
MF GO:0045182 translation regulator activity IEP Neighborhood
MF GO:0047012 sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051011 microtubule minus-end binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0070628 proteasome binding IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072337 modified amino acid transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 306 347
IPR027370 Znf-RING_LisH 192 228
No external refs found!