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  5. Zm00001e021243_P003

Zm00001e021243_P003


Description : GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana (sp|q0wtb4|y3725_arath : 148.0)


Gene families : OG0004815 (Archaeplastida) Phylogenetic Tree(s): OG0004815_tree ,
OG_05_0008145 (LandPlants) Phylogenetic Tree(s): OG_05_0008145_tree ,
OG_06_0009815 (SeedPlants) Phylogenetic Tree(s): OG_06_0009815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021243_P003
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00233660 evm_27.TU.AmTr_v1... GTP-binding protein At3g49725, chloroplastic... 0.06 Archaeplastida
AT5G57960 No alias GTP-binding protein, HflX 0.07 Archaeplastida
GSVIVT01009778001 No alias GTP-binding protein At3g49725, chloroplastic... 0.04 Archaeplastida
Gb_27515 No alias component MED19 of head module of MEDIATOR transcription... 0.07 Archaeplastida
LOC_Os11g38020.1 No alias GTP-binding protein At3g49725, chloroplastic... 0.13 Archaeplastida
MA_10437248g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_422619g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_957994g0010 No alias No annotation 0.05 Archaeplastida
Mp8g01100.1 No alias GTP-binding protein At3g49725, chloroplastic... 0.04 Archaeplastida
Pp3c26_340V3.1 No alias GTP-binding protein, HflX 0.05 Archaeplastida
Smo77541 No alias GTP-binding protein At3g49725, chloroplastic... 0.04 Archaeplastida
Solyc04g080770.3.1 No alias GTP-binding protein At3g49725, chloroplastic... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032305 GTP-bd_M 245 322
IPR006073 GTP_binding_domain 330 448
IPR025121 GTPase_HflX_N 153 242
No external refs found!