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  5. Zm00001e021967_P001

Zm00001e021967_P001


Description : no hits & (original description: none)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021967_P001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 Archaeplastida
AT1G53160 SPL4 squamosa promoter binding protein-like 4 0.03 Archaeplastida
GSVIVT01018205001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01033064001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Gb_26599 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os04g46580.1 No alias transcription factor (SBP) 0.05 Archaeplastida
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os06g44860.1 No alias transcription factor (SBP) 0.07 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os09g31438.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os11g30370.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025234_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e030416_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e034537_P001 No alias transcription factor (SBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!