- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component beta of TATA box-binding protein NC2 regulator complex
Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0003843 (LandPlants) Phylogenetic Tree(s): OG_05_0003843_tree ,
OG_06_0004109 (SeedPlants) Phylogenetic Tree(s): OG_06_0004109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e022327_P001 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_10622 | No alias | component NF-YB of NF-Y transcription factor complex | 0.03 | Archaeplastida | |
| LOC_Os03g29970.1 | No alias | component NF-YB of NF-Y transcription factor complex | 0.02 | Archaeplastida | |
| Pp3c3_13480V3.1 | No alias | nuclear factor Y, subunit B3 | 0.05 | Archaeplastida | |
| Zm00001e019379_P006 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003958 | CBFA_NFYB_domain | 15 | 79 |
| No external refs found! |