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  5. Zm00001e023068_P001

Zm00001e023068_P001


Description : GEM-like protein 4 OS=Arabidopsis thaliana (sp|q9fta0|geml4_arath : 174.0)


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000920 (LandPlants) Phylogenetic Tree(s): OG_05_0000920_tree ,
OG_06_0000471 (SeedPlants) Phylogenetic Tree(s): OG_06_0000471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023068_P001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G01600 No alias GRAM domain family protein 0.03 Archaeplastida
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 Archaeplastida
AT5G13200 No alias GRAM domain family protein 0.02 Archaeplastida
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 Archaeplastida
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 Archaeplastida
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019136001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g42440.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g52670.1 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os04g44500.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g44510.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.1 Archaeplastida
LOC_Os12g29400.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_2965641g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_84315g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_99608g0020 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c22_5280V3.1 No alias GRAM domain family protein 0.02 Archaeplastida
Smo85701 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g098660.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc08g078510.3.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g011580.2.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc11g011600.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e015212_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e039556_P001 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 108 226
No external refs found!