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  5. Zm00001e023786_P003

Zm00001e023786_P003


Description : transcription factor (HD-ZIP IV)


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0004621 (SeedPlants) Phylogenetic Tree(s): OG_06_0004621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023786_P003
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT1G05230 HDG2 homeodomain GLABROUS 2 0.03 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.07 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.07 Archaeplastida
AT4G26920 No alias START (StAR-related lipid-transfer) lipid-binding domain 0.03 Archaeplastida
GSVIVT01027508001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
GSVIVT01030605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_16030 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os02g45250.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.12 Archaeplastida
LOC_Os08g04190.1 No alias transcription factor (HD-ZIP IV) 0.07 Archaeplastida
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.12 Archaeplastida
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
MA_10318273g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_10374232g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_103885g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_10426189g0030 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_10433688g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_1086446g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_1086446g0020 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_110607g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_122121g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
MA_16767g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_17048g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_305431g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
MA_761114g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_8859629g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_93471g0010 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Pp3c17_16910V3.1 No alias protodermal factor 2 0.03 Archaeplastida
Pp3c1_24020V3.1 No alias protodermal factor 2 0.03 Archaeplastida
Pp3c2_10790V3.1 No alias protodermal factor 2 0.02 Archaeplastida
Smo403927 No alias No description available 0.02 Archaeplastida
Solyc01g091630.3.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Solyc03g031760.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g098200.4.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc03g120620.3.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc06g072310.3.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Solyc08g076370.3.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc10g005330.3.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 18 73
IPR002913 START_lipid-bd_dom 210 434
No external refs found!