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  5. Zm00001e024276_P001

Zm00001e024276_P001


Description : transcription factor (HUA2)


Gene families : OG0001669 (Archaeplastida) Phylogenetic Tree(s): OG0001669_tree ,
OG_05_0001314 (LandPlants) Phylogenetic Tree(s): OG_05_0001314_tree ,
OG_06_0004134 (SeedPlants) Phylogenetic Tree(s): OG_06_0004134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024276_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HUA2... 0.06 Archaeplastida
AT2G48160 No alias Tudor/PWWP/MBT domain-containing protein 0.02 Archaeplastida
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.09 Archaeplastida
AT5G08230 No alias Tudor/PWWP/MBT domain-containing protein 0.04 Archaeplastida
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.04 Archaeplastida
GSVIVT01011100001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.18 Archaeplastida
GSVIVT01012049001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.07 Archaeplastida
Gb_39860 No alias transcription factor (HUA2) 0.05 Archaeplastida
LOC_Os03g24339.1 No alias transcription factor (HUA2) 0.1 Archaeplastida
LOC_Os07g46180.1 No alias transcription factor (HUA2) 0.1 Archaeplastida
LOC_Os08g01054.2 No alias transcription factor (HUA2) 0.09 Archaeplastida
MA_3338g0010 No alias transcription factor (HUA2) 0.03 Archaeplastida
MA_6096998g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6999g0010 No alias Protein HUA2-LIKE 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9328225g0010 No alias Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_9359526g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp8g15320.1 No alias transcription factor (HUA2) 0.1 Archaeplastida
Pp3c11_11950V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.06 Archaeplastida
Pp3c7_13020V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.03 Archaeplastida
Pp3c7_13060V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.13 Archaeplastida
Smo404055 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.04 Archaeplastida
Smo414202 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.05 Archaeplastida
Solyc02g014115.1.1 No alias transcription factor (HUA2) 0.06 Archaeplastida
Solyc02g014130.3.1 No alias ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc09g064840.4.1 No alias transcription factor (HUA2) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000313 PWWP_dom 20 109
IPR006903 RNA_pol_II-bd 857 924
No external refs found!