Zm00001e025447_P001

Description : Chitinase 10 OS=Oryza sativa subsp. japonica (sp|q5nb11|chi10_orysj : 416.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e025447_P001
Cluster	HCCA: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.02	Archaeplastida
AMTR_s00001p00243680	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
AMTR_s00001p00243780	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
AT1G05850	HOT2, ELP,...	Chitinase family protein	0.03	Archaeplastida
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.03	Archaeplastida
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
GSVIVT01038111001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_20765	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_29991	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os05g33150.1	No alias	Chitinase 7 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os09g32080.2	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
MA_10099693g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_10435326g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_134123g0010	No alias	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 106.0)	0.03	Archaeplastida
MA_381956g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp4g01780.1	No alias	Endochitinase CH5B OS=Phaseolus vulgaris...	0.02	Archaeplastida
Pp3c13_18820V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Solyc02g082960.3.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.06	Archaeplastida
Solyc06g053380.3.1	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055071	manganese ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	47	279

External Links

No external refs found!

Zm00001e025447_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation