1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e025465_P001

Zm00001e025465_P001


Description : subunit beta of cargo adaptor F-subcomplex


Gene families : OG0003156 (Archaeplastida) Phylogenetic Tree(s): OG0003156_tree ,
OG_05_0003042 (LandPlants) Phylogenetic Tree(s): OG_05_0003042_tree ,
OG_06_0003893 (SeedPlants) Phylogenetic Tree(s): OG_06_0003893_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025465_P001
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 Archaeplastida
AT4G31480 No alias Coatomer, beta subunit 0.19 Archaeplastida
AT4G31490 No alias Coatomer, beta subunit 0.21 Archaeplastida
Cpa|evm.model.tig00020553.156 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.11 Archaeplastida
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.13 Archaeplastida
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.09 Archaeplastida
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.11 Archaeplastida
LOC_Os01g17430.1 No alias subunit beta of cargo adaptor F-subcomplex 0.16 Archaeplastida
LOC_Os11g07280.1 No alias subunit beta of cargo adaptor F-subcomplex 0.19 Archaeplastida
MA_10431517g0010 No alias subunit beta of cargo adaptor F-subcomplex 0.11 Archaeplastida
MA_10432097g0020 No alias subunit beta of cargo adaptor F-subcomplex 0.07 Archaeplastida
MA_230138g0010 No alias subunit beta of cargo adaptor F-subcomplex 0.12 Archaeplastida
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.1 Archaeplastida
Pp3c25_10770V3.1 No alias Coatomer, beta subunit 0.08 Archaeplastida
Pp3c6_720V3.1 No alias Coatomer, beta subunit 0.08 Archaeplastida
Pp3c7_8430V3.1 No alias Coatomer, beta subunit 0.09 Archaeplastida
Smo160340 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Solyc01g007150.3.1 No alias subunit beta of cargo adaptor F-subcomplex 0.13 Archaeplastida
Solyc10g081920.2.1 No alias subunit beta of cargo adaptor F-subcomplex 0.14 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011710 Coatomer_bsu_C 671 809
IPR002553 Clathrin/coatomer_adapt-like_N 21 471
IPR029446 COPB1_appendage_platform_dom 815 942
No external refs found!