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  5. Zm00001e027763_P001

Zm00001e027763_P001


Description : large subunit of carbamoyl phosphate synthetase heterodimer. large subunit of carbamoyl phosphate synthetase heterodimer


Gene families : OG0003051 (Archaeplastida) Phylogenetic Tree(s): OG0003051_tree ,
OG_05_0004347 (LandPlants) Phylogenetic Tree(s): OG_05_0004347_tree ,
OG_06_0005710 (SeedPlants) Phylogenetic Tree(s): OG_06_0005710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027763_P001
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00226690 evm_27.TU.AmTr_v1... Nucleotide metabolism.pyrimidines.ribonucleotide... 0.03 Archaeplastida
AT1G29900 CARB carbamoyl phosphate synthetase B 0.07 Archaeplastida
Cpa|evm.model.tig00021319.3 No alias Nucleotide metabolism.pyrimidines.ribonucleotide... 0.02 Archaeplastida
GSVIVT01025125001 No alias Nucleotide metabolism.pyrimidines.ribonucleotide... 0.03 Archaeplastida
Mp4g19600.1 No alias large subunit of carbamoyl phosphate synthetase... 0.02 Archaeplastida
Pp3c1_18250V3.1 No alias carbamoyl phosphate synthetase B 0.02 Archaeplastida
Pp3c2_19430V3.1 No alias carbamoyl phosphate synthetase B 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011607 MGS-like_dom 1043 1128
IPR005480 CarbamoylP_synth_lsu_oligo 499 618
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 757 961
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 199 406
No external refs found!