Coexpression cluster: Cluster_195 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 68.18% (30/44) 1.27 0.0 4e-06
GO:0005488 binding 52.27% (23/44) 1.68 0.0 8e-06
GO:0051020 GTPase binding 9.09% (4/44) 6.42 0.0 9e-06
GO:0016877 ligase activity, forming carbon-sulfur bonds 6.82% (3/44) 7.38 1e-06 2.3e-05
GO:0008641 ubiquitin-like modifier activating enzyme activity 6.82% (3/44) 7.38 1e-06 2.3e-05
GO:0019899 enzyme binding 9.09% (4/44) 5.88 1e-06 3e-05
GO:0098772 molecular function regulator 11.36% (5/44) 4.57 2e-06 4.5e-05
GO:1901363 heterocyclic compound binding 36.36% (16/44) 1.86 3e-06 4.6e-05
GO:0097159 organic cyclic compound binding 36.36% (16/44) 1.86 3e-06 4.6e-05
GO:0003676 nucleic acid binding 25.0% (11/44) 2.52 2e-06 5e-05
GO:0006413 translational initiation 6.82% (3/44) 6.95 2e-06 5e-05
GO:0016874 ligase activity 9.09% (4/44) 5.04 7e-06 0.000105
GO:0003743 translation initiation factor activity 6.82% (3/44) 6.26 8e-06 0.000117
GO:0032012 regulation of ARF protein signal transduction 4.55% (2/44) 7.88 3.1e-05 0.000292
GO:0046578 regulation of Ras protein signal transduction 4.55% (2/44) 7.88 3.1e-05 0.000292
GO:1902531 regulation of intracellular signal transduction 4.55% (2/44) 7.88 3.1e-05 0.000292
GO:0051056 regulation of small GTPase mediated signal transduction 4.55% (2/44) 7.88 3.1e-05 0.000292
GO:0005086 ARF guanyl-nucleotide exchange factor activity 4.55% (2/44) 7.88 3.1e-05 0.000292
GO:0003723 RNA binding 11.36% (5/44) 3.84 2.6e-05 0.000335
GO:0008135 translation factor activity, RNA binding 6.82% (3/44) 5.4 5.1e-05 0.00046
GO:0005515 protein binding 22.73% (10/44) 2.17 5.5e-05 0.000477
GO:0023051 regulation of signaling 4.55% (2/44) 7.3 7.2e-05 0.000544
GO:0010646 regulation of cell communication 4.55% (2/44) 7.3 7.2e-05 0.000544
GO:0009966 regulation of signal transduction 4.55% (2/44) 7.3 7.2e-05 0.000544
GO:0048583 regulation of response to stimulus 4.55% (2/44) 6.98 0.000114 0.000829
GO:0008150 biological_process 43.18% (19/44) 1.23 0.000128 0.000895
GO:0008536 Ran GTPase binding 4.55% (2/44) 6.56 0.000205 0.001385
GO:0005085 guanyl-nucleotide exchange factor activity 4.55% (2/44) 6.36 0.000273 0.001775
GO:0009987 cellular process 27.27% (12/44) 1.62 0.000336 0.002108
GO:0016070 RNA metabolic process 9.09% (4/44) 3.42 0.000525 0.003184
GO:0017016 Ras GTPase binding 4.55% (2/44) 5.71 0.000674 0.003833
GO:0031267 small GTPase binding 4.55% (2/44) 5.71 0.000674 0.003833
GO:0030234 enzyme regulator activity 6.82% (3/44) 4.05 0.0008 0.004411
GO:0060589 nucleoside-triphosphatase regulator activity 4.55% (2/44) 5.27 0.001247 0.006676
GO:0090304 nucleic acid metabolic process 9.09% (4/44) 2.99 0.001616 0.008401
GO:0097659 nucleic acid-templated transcription 4.55% (2/44) 4.6 0.003123 0.015364
GO:0006351 transcription, DNA-templated 4.55% (2/44) 4.6 0.003123 0.015364
GO:0006139 nucleobase-containing compound metabolic process 9.09% (4/44) 2.58 0.004461 0.021368
GO:0034641 cellular nitrogen compound metabolic process 11.36% (5/44) 2.17 0.004831 0.022545
GO:0044237 cellular metabolic process 20.45% (9/44) 1.44 0.005029 0.02288
GO:0042802 identical protein binding 2.27% (1/44) 7.3 0.006333 0.026197
GO:0042803 protein homodimerization activity 2.27% (1/44) 7.3 0.006333 0.026197
GO:0000774 adenyl-nucleotide exchange factor activity 2.27% (1/44) 7.3 0.006333 0.026197
GO:0032774 RNA biosynthetic process 4.55% (2/44) 4.08 0.00632 0.028053
GO:0006725 cellular aromatic compound metabolic process 9.09% (4/44) 2.38 0.0072 0.028488
GO:0046483 heterocycle metabolic process 9.09% (4/44) 2.39 0.007064 0.02857
GO:1901360 organic cyclic compound metabolic process 9.09% (4/44) 2.34 0.007944 0.030121
GO:0030554 adenyl nucleotide binding 13.64% (6/44) 1.77 0.007798 0.030196
GO:0006886 intracellular protein transport 4.55% (2/44) 3.87 0.008299 0.030824
GO:0007165 signal transduction 4.55% (2/44) 3.61 0.01179 0.037647
GO:0046907 intracellular transport 4.55% (2/44) 3.61 0.01179 0.037647
GO:0051649 establishment of localization in cell 4.55% (2/44) 3.61 0.01179 0.037647
GO:0007264 small GTPase mediated signal transduction 2.27% (1/44) 6.56 0.010534 0.038343
GO:0000375 RNA splicing, via transesterification reactions 2.27% (1/44) 6.42 0.011581 0.039033
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.27% (1/44) 6.42 0.011581 0.039033
GO:0000398 mRNA splicing, via spliceosome 2.27% (1/44) 6.42 0.011581 0.039033
GO:0060590 ATPase regulator activity 2.27% (1/44) 6.42 0.011581 0.039033
GO:0033036 macromolecule localization 4.55% (2/44) 3.38 0.015981 0.040398
GO:0008104 protein localization 4.55% (2/44) 3.38 0.015981 0.040398
GO:0045184 establishment of protein localization 4.55% (2/44) 3.38 0.015816 0.041122
GO:0005092 GDP-dissociation inhibitor activity 2.27% (1/44) 5.98 0.01576 0.04157
GO:1903293 phosphatase complex 2.27% (1/44) 5.98 0.01576 0.04157
GO:0008287 protein serine/threonine phosphatase complex 2.27% (1/44) 5.98 0.01576 0.04157
GO:0042886 amide transport 4.55% (2/44) 3.42 0.015163 0.041814
GO:0015833 peptide transport 4.55% (2/44) 3.42 0.015163 0.041814
GO:0015031 protein transport 4.55% (2/44) 3.42 0.015163 0.041814
GO:0017076 purine nucleotide binding 13.64% (6/44) 1.6 0.013509 0.042392
GO:0034645 cellular macromolecule biosynthetic process 6.82% (3/44) 2.54 0.014748 0.042605
GO:0016192 vesicle-mediated transport 4.55% (2/44) 3.48 0.013894 0.042859
GO:0005783 endoplasmic reticulum 2.27% (1/44) 6.08 0.014717 0.043202
GO:0000159 protein phosphatase type 2A complex 2.27% (1/44) 6.08 0.014717 0.043202
GO:0051641 cellular localization 4.55% (2/44) 3.46 0.014364 0.043571
GO:0009059 macromolecule biosynthetic process 6.82% (3/44) 2.45 0.017631 0.043956
GO:0019888 protein phosphatase regulator activity 2.27% (1/44) 5.71 0.018883 0.046442
GO:0000166 nucleotide binding 13.64% (6/44) 1.47 0.020009 0.047293
GO:1901265 nucleoside phosphate binding 13.64% (6/44) 1.47 0.020009 0.047293
GO:0019208 phosphatase regulator activity 2.27% (1/44) 5.64 0.019922 0.048343
GO:0071705 nitrogen compound transport 4.55% (2/44) 3.16 0.021086 0.048578
GO:0008380 RNA splicing 2.27% (1/44) 5.56 0.020959 0.048905
GO:0043170 macromolecule metabolic process 15.91% (7/44) 1.3 0.021518 0.048954
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_99 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_115 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_127 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_162 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.039 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_254 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_183 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_189 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_203 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_236 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.034 Archaeplastida Compare
Gingko biloba HCCA Cluster_102 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_147 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_212 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_241 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_338 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_281 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_294 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_316 0.033 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_152 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_191 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_531 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_96 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_364 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_382 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_409 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_472 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_523 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_211 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_359 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_143 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_179 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_188 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_60 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_180 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_212 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_262 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_92 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_189 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_223 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.046 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_141 0.023 Archaeplastida Compare
Sequences (44) (download table)

InterPro Domains

GO Terms

Family Terms